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While the regular 2-D mesh topology has been utilized for most of network-on-chips (NoCs) on FPGAs, spatially biased traffic in some applications make some customization method feasible. A link removal strategy that customizes the router in NoC is proposed for reconfigurable systems in order to minimize required hardware amount. Based on the pre-analyzed traffic information, links on which the communication...
A temporal correlation based port combination algorithm that customizes the router design in network-on-chip (NoC) is proposed for reconfigurable systems in order to minimize required hardware amount. Given the traffic characteristics of the target application and the expected hardware amount reduction rate, the algorithm automatically makes the port combination plan for the networks. Since the port...
Biochemical simulations including whole-cell models require high performance computing systems. Reconfigurable systems are expected to be an alternative solution for conventional methods by PC clusters or vector computers. This paper shows the implementation of a stochastic biochemical simulation algorithm called Next Reaction Method for Virtex-II PRO. As the result of benchmarking with a small reaction...
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