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Deoxyribonucleic Acid (DNA) sequence alignment is essentially a way of comparing two or more DNA sequences with aim to find regions of similarities among them. The Smith-Waterman (SW) algorithm is a local alignment algorithm which is able to identify mutation in DNA sequences. However, the aforementioned algorithm tends to be slower in computation of long DNA sequences. Over decades ago, Field Programmable...
Computational Molecular Biology, Bioinformatics and Genomics are the most intriguing sciences to understand the human genome and diseases. These sciences use algorithms to analyze, and predict a hypothesis for the huge collected biological data in gene banks. Sequence alignment is the most important topics in bioinformatics which we are concerned with it in this paper. In comparison of bimolecular...
The paper deals with a very hot problem concerning computation biology - the searching for a given reference pattern within a very long DNA chain. The software solutions in the field are limited by amount of resources and processing times. That is why complex programmable devices are more and more commonly used in the applications concerning microbiology. The paper presents the approach which is a...
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