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FPGA-based reconfigurable computing is finding its way into a wide range of application areas in which high performance and low power consumption are paramount. However, FPGA-application development using hardware-description languages (HDLs) faces many productivity challenges that limit its wide adoption, including a steep learning curve and lengthy compilation. High-level synthesis (HLS) languages...
The Graph500 benchmark is designed to evaluate the suitability of supercomputing systems for graph algorithms, which are increasingly important in HPC. The timed Graph500 kernel, Breadth First Search, exhibits memory access patterns typical of these types of applications, with poor spatial locality and synchronization between multiple streams of execution. The Graph500 benchmark was ported to the...
The Graph500 benchmark is designed to evaluate the suitability of supercomputing systems for graph algorithms, which are increasingly important in HPC. The timed Graph500 kernel, Breadth First Search, exhibits memory access patterns typical of these types of applications, with poor spatial locality and synchronization between multiple streams of execution. The Graph500 benchmark was ported to the...
Editor's note:The significant growth in the quantity of data in biology and related fields has spawned the need for novel computational solutions. The authors show how a key search task in proteomics, the large-scale study of proteins, can be accelerated by several orders of magnitude by the use of FPGA-based hardware.—George A. Constantinides (Imperial College London) and Nicola Nicolici...
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