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In biological imaging the data is often represented by a sequence of anisotropic frames — the resolution in one dimension is significantly lower than in the other dimensions. E.g. in electron microscopy it arises from the thickness of a scanned section. This leads to blurred images and raises problems in tasks like neuronal image segmentation. We present an approach called SuperSlicing to decompose...
The precision-recall curve (PRC) has become a widespread conceptual basis for assessing classification performance. The curve relates the positive predictive value of a classifier to its true positive rate and often provides a useful alternative to the well-known receiver operating characteristic (ROC). The empirical PRC, however, turns out to be a highly imprecise estimate of the true curve, especially...
In the field of neuroanatomy, automatic segmentation of electron microscopy images is becoming one of the main limiting factors in getting new insights into the functional structure of the brain. We propose a novel framework for the segmentation of thin elongated structures like membranes in a neuroanatomy setting. The probability output of a random forest classifier is used in a regular cost function,...
We address the task of learning a semantic segmentation from weakly supervised data. Our aim is to devise a system that predicts an object label for each pixel by making use of only image level labels during training - the information whether a certain object is present or not in the image. Such coarse tagging of images is faster and easier to obtain as opposed to the tedious task of pixelwise labeling...
The enhancement of speech degraded by non-stationary interferers is a highly relevant and difficult task of many signal processing applications. We present a monaural speech enhancement method based on sparse coding of noisy speech signals in a composite dictionary, consisting of the concatenation of a speech and interferer dictionary, both being possibly over-complete. The speech dictionary is learned...
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