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A three-dimensional surface-based progressive alignment algorithm is proposed to recover nonlinear deformation field. The deformation field is represented with a multi-resolution wavelet expansion and is modeled by the partial differential equations of linear elasticity. We report of its use in spatial normalization of mouse brains reconstructed from sectional material. The wavelet alignment algorithm...
Visualization software for three dimensional digital brain atlases present many challenges in design and implementation. These challenges include the design of an effective human interface, management of large data sets, display speed when slicing the data set for viewing/browsing, and the display of delineated volumes of interest (VOI). We present a software design, implementation and storage architecture...
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