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•A highly conserved Toll-like receptor (TLR) signaling pathway exists in B. glabrata.•NF-κB-binding sites were predicted upstream of genes for TLR pathway components.•Several putative κB-binding sites were specifically bound by Rel homology domain.•B. glabrata TLR pathway may be partially regulated by NF-κB.•B. glabrata NF-κB may self-regulate its activity via regulation of IκB expression.