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Background As a traditional Chinese herb, safflower (Carthamus tinctorius L.) is valued for its florets to prevent cardiovascular and cerebrovascular diseases. Basing on previous chemical analysis, the main active compounds are flavonoids in its florets. Although flavonoid biosynthetic pathway has been well-documented in many model species, unique biosynthetic pathway remains to be explored in safflower...
Scientists, educators, and students benefit from having free and centralized access to the wealth of metabolic information that has been gathered over the decades. Curators of the MetaCyc database work to present this information in an easily understandable pathway‐based framework. MetaCyc is used not only as an encyclopedic resource for metabolic information but also as a template for the pathway...
In this context, we report the availability of a convenient server for the bacterial community prediction of metagenome which can be accessed from http://bioinfo.ustc.edu. cn/softwares/bcp-mg/. This tool predicts the bacterial community according to the enzyme information extracted from the annotation of metagenomic sample or the metabolic network reconstructed from this data. Optional constraints...
More and more environmental microbial communities, also known as metagenomes, are sequenced and analysed in the past few years. Improving the understanding of metagenomic metabolism based on metabolic reconstruction, has wide potential applications and attracts more and more attentions. The current approach for metabolic reconstruction of metagenomes predicts metabolic pathway based on the available...
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