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Despite of being a very common task in bioinformatics, multiple sequence alignment is not a trivial matter. Arranging a set of molecular sequences to reveal their similarities and their differences is often hardened by the complexity and the size of the search space involved, which undermine the approaches that try to explore exhaustively the solution's search space. Due to its nature, Genetic Algorithms,...
A new evolutionary computing algorithm on the basis of the ldquojumping genesrdquo (JG) phenomenon is proposed in this paper. It emulates the gene transposition in the genome that was discovered by Nobel Laureate, Barbara McClintock, in her work on the corn plants. The principle of JGs that is adopted for evolutionary computing is outlined. The procedures for executing the computational optimization...
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