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Programming-by-example (PbE) as a technique can only make substantial progress by addressing the open problem commonly known as the Semantic Gap. This gap is the discrepancy between what the user intended by their actions, and how the inference engine generalizes the actions for reuse in a program. The Seahawk/Daggoo PbE system attempts to close this gap in a novel way: by using Semantic Web and Web...
The following topics are dealt with: embedded data-centric systems; defence against spam in electronic communication; Web semantics; business processes security; secure systems methodologies using patterns; biological knowledge discovery and data mining; multimedia data mining and management; management and interaction with multimodal information content; database technology for data management in...
As the availability of Web services for the biological domain increases, the need emerges for a Web service composition designer that is easy for biologists to use. Our work focuses on providing biologists and bioinformaticians with an online, semantic Web service composition tool. We adapt a bioinformatics tool called Galaxy, to support semantic Web service composition. A semi-automatic approach...
Recently, the world is hunting for using life sciences data in solving the problems of fighting hunger in the next coming years. Integrating this data can be useful in areas of agricultural bioinformatics and other disciplines. However, efficient integration techniques must be developed to biological data since biological data has its own challenging characteristics, such as the existence of huge...
Semantic annotations for WSDL (SAWSDL) is a recently adopted W3C recommendation that provides a mechanism by which WSDL documents can reference external, domain-specific semantic models in order to provide concept-level interoperability of Web Services. Moby is an established protocol for providing semantic Web Services developed by the bioinformatics community: we use Moby to provide a grounding...
As the Web services and grid community adopt semantic Web technology, we observe a shift towards higher-level workflow composition and service discovery practices. While this provides excellent functionality to non-expert users, more sophisticated middleware is required to hide the details of service invocation and service integration. An investigation of a common bioinformatics use case reveals that...
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