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Molecular Dynamics (MD) simulations have been widely used in the study of macromolecules. To ensure an acceptable level of statistical accuracy relatively large number of particles are needed, which calls for high performance implementations of MD. These days heterogeneous systems, with their high performance potential, low power consumption, and high price-performance ratio, offer a viable alternative...
As the size and complexity of scientific problems and datasets grow, scientists from a broad range of discipline areas are relying more and more on computational methods and simulations to help solve their problems. This paper presents a summary of heterogeneous algorithms and applications that have been developed by a large research organization (CSIRO) for solving practical and challenging science...
GPUs are at the fore-front of a radical transformation that is taking place in software design. The ability to process multiple data streams simultaneously is delivering substantial benefits to a large collection of domains. Depending on the application, these benefits can be expanded by utilizing the not-insignificant power of traditional CPUs. Multi-core CPUs with a hierarchy of large and fast caches,...
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