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Much attention has been paid to the technically research and practical application of prediction of protein subcellular location since a great number of previous works by researchers proved the close relationship between protein function and its location as well as human genome project successfully completed over last decades. With rapid progress of computer's calculating speed, computational intelligence...
Normalized compression distance (NCD) is a compression based pairwise distance measure. NCD has been shown to perform well in different domains, such as music, biological sequence and text classification. In this study, we use NCD distance together with Smith-Waterman (SW) alignment scores of protein sequences for gene ontology prediction. We find out that, using secondary structure in addition to...
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