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The use of network analysis as a means of visualizing the off‐diagonal (misclassified) elements of a confusion matrix is demonstrated, and the potential to use the network graphs as a guide for developing hierarchical classification models is presented. A very brief summary of graph theory is described. This is followed by an explanation and code with examples of how these networks can then be used...
The Membranome database provides comprehensive structural information on single‐pass (i.e., bitopic) membrane proteins from six evolutionarily distant organisms, including protein–protein interactions, complexes, mutations, experimental structures, and models of transmembrane α‐helical dimers. We present a new version of this database, Membranome 3.0, which was significantly updated by revising the...