The immigration of over a million refugees in 2015 posed various challenges for politics and public administration, which included finding a way of dealing with religious diversity and practices in refugee accommodations. Our goal is to examine how employees of these accommodations handle religious needs and conflicts and how their interpretations and orientations shape organizational behavior. In so doing, we build on an explorative qualitative survey on refugee accommodations in Lower Saxony, Germany, which was conducted in the years 2016–2017. There are three main focal points: of the handling of religious neutrality against the backdrop of a substantial number of Muslim residents; the approach to religious practices and holidays; and the interpretation and regulation of religious and ethnic-national conflicts. In conclusion, we find that the handling of religious diversity is, in most cases, based on a restrictive understanding of religious neutrality wherein the employees’ scope of action is (quite) extensive. Religious conflicts, meanwhile, tend to play only a minor role.