The current state of the problem of changes of brain functional asymmetry in psychopathology is reviewed from the point of view of disorders of interhemispheric interaction as the main chain in genesis of affective disorders and schizophrenia. Based on studies of individual activation of the left and right hemispheres as well as on evaluation of cognitive activity, it is shown that psychopathology is accompanied by a disorder of hemispheric interaction with shift of the interhemispheric activation balance towards the right hemisphere in depression and towards the left hemisphere in maniacal states and paranoid schizophrenia. Changes of the activation balance lead to disorder of cognitive activity and human adaptation in the environment. A conclusion is made that disinhibition of subcortical and brainstem structures in psychoses occurs not only vertically, but also horizontally, when the complementary and superpositional interaction of hemispheres shifts to the evolutionary earlier reciprocal type of interaction with domination of cognitive functions of the right hemisphere in depression and of the left hemisphere in the maniacal state and schizophrenia.