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Classification tree-based risk stratification models generate easily interpretable classification rules. This feature makes classification tree-based models appealing for use in a clinical setting, provided that they have comparable accuracy to other methods. In this paper, we present and evaluate the performance of a non-symmetric entropy-based classification tree algorithm. The algorithm is designed...
Hemorrhagic shock is the cause of one third of deaths resulting from injury in the world. Early diagnosis of hemorrhagic shock makes it possible for physicians to treat patients successfully. The objective of this study was to select an optimal survival prediction model using physiological parameters from rats during our hemorrhagic experiment. These physiological parameters were used for the training...
Sepsis is a transversal pathology and one of the main causes of death at the Intensive Care Unit (ICU). It has in fact become the tenth most common cause of death in western societies. Its mortality rates can reach up to 45.7% for septic shock, its most acute manifestation. For these reasons, the prediction of the mortality caused by sepsis is an open and relevant medical research challenge. This...
Here, we propose a training data selection method using a Support Vector Machine (SVM) to predict the effects of anticancer drugs. Conventionally, SVM is used for distinguishing between several types of data. However, in the method proposed here, the SVM is used to distinguish areas with only one or two types of data. The proposed method treats training data selection as an optimization problem and...
Machine learning has been largely applied to analyze data in various domains, but it is still new to personalized medicine, especially dose individualization. In this paper, we focus on the prediction of drug concentrations using Support Vector Machines (S VM) and the analysis of the influence of each feature to the prediction results. Our study shows that SVM-based approaches achieve similar prediction...
Computer-aided decision support systems enable physicians to make more accurate clinical decisions and can significantly improve the quality of care provided to patients. However, prediction of classification confidence as the degree of reliability on the resulting predictions is a much needed step in clinical decision making. A recently developed technique called conformal prediction utilizes the...
Low-power devices that can detect clinically relevant correlations in physiologically-complex patient signals can enable systems capable of closed-loop response (e.g., controlled actuation of therapeutic stimulators, continuous recording of disease states, etc.). In ultra-low-power platforms, however, hardware error sources are becoming increasingly limiting. In this paper, we present how data-driven...
Predict the function of unknown proteins is one of the principal goals in computational biology. The subcellular localization of a protein allows further understanding its structure and molecular function. Numerous prediction techniques have been developed, usually focusing on global information of the protein. But, predictions can be done through the identification of functional sub-sequence patterns...
Myocardial infarction (MI), generally known as a heart attack, is one of the top leading causes of mortality in the world. In clinical diagnosis, cardiologists generally utilize 12-lead ECG system to classify patients into MI symptoms: 1. ST segment elevation, 2. ST segment depression or T wave inversion. However unstable ischemic syndromes have rapidly changing supply versus demand characteristics...
A framework for online dynamic channel weighting is developed for the task of EEG-based neonatal seizure detection. The channel weights are computed on-the-fly by combining the up-to-now patient-specific history and the clinically-derived prior channel importance. These estimated time-varying weights are introduced within a Bayesian probabilistic framework to provide a channel-specific and thus patient-adaptive...
Falls are a prominent problem facing older adults and a common cause of hospitalized injuries. Accurate falls-risk assessment and classification of falls-risk levels will provide useful information for the prevention of future falls. This study presents a triaxial accelerometer (TA) based two-class classifier, which discriminates between multiple fallers and non-multiple fallers, using a directed-routine...
In this paper we present surface electromyo-graphic (EMG) data collected from 16 channels on five unimpaired subjects and one transradial amputee performing 12 individual finger movements and a rest class. EMG were processed using a traditional Time Domain feature-set and classifiers: a Linear Discriminant Analysis (LDA) a k-Nearest Neighbors (k-NN) and Support Vector Machine (SVM). Using continuous...
The reduction of the number of EEG features to give as inputs to epilepsy seizure predictors is a needed step towards the development of a transportable device for real-time warning. This paper presents a comparative study of three feature selection methods, based on Support Vector Machines. Minimum-Redundancy Maximum-Relevance, Recursive Feature Elimination, Genetic Algorithms, show that, for three...
A new low complexity seizure prediction algorithm is proposed. The algorithm achieves high sensitivity and low false positive rates in 10 out of 18 epileptic patients from the Freiburg database. Its primary achievement is two orders of magnitude computational complexity reduction. The reduced complexity makes an implantable medical device application realizable. In the subset of ten highly predictable...
Electrocardiogram (ECG) is the P-QRS-T wave which indicates the electrical activity of the heart. The subtle changes in the amplitude and duration of the ECG signal depict the cardiac abnormality. It is very difficult to decipher these minute changes by the naked eye. Hence, a computer-aided diagnosis system will help the physicians to monitor the cardiac health. The ECG is a nonlinear and non-stationary...
To make it viable for remote monitoring to scale to large patient populations, the accuracy of detectors used to identify patient states of interests must improve. Patient-specific detectors hold the promise of higher accuracy than generic detectors, but the need to train these detectors individually for each patient using expert labeled data limits their scalability. We explore a solution to this...
To investigate the neural activity corresponding to different cognitive states, it is of great importance to localize the cortical areas that are associated with task-related modulation. In this paper, we propose a novel discriminant pattern source localization (DPSL) method to analyze MEG data. Unlike most traditional source localization methods that aim to find “dominant” sources, DPSL is developed...
Approximate Entropy (ApEn) and Permutation Entropy (PE) have been recently introduced for assessment of anesthetic depth. Both measures have previously been shown to track changes in the electrical brain activity related to the administration of anesthetic agents. In this paper ApEn and PE are compared for the automatic classification of ‘awake’ and ‘anesthetized’ state using a Support Vector Machine...
While a healthy human heart produce a rhythmic pattern of sounds, some heart disorder induce deviations perceived as abnormal sounds called murmurs. Despite many murmurs can be considered harmless, other constitute the first basis of a heart disorder. In this sense, a correct diagnosis remains essential; however, due to the subjectivity on using human ear to make diagnosis, automatic detection systems...
We have shown that the slow eye movements extracted from electrooculogram (EOG) signals can be used to estimate human vigilance in our previous work. However, the traditional method for recording EOG signals is to place the electrodes near the eyes of subjects. This placement is inconvenient for users in real-world applications. This paper aims to find a more practical placement for acquiring EOG...
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