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In clinical routine of liver surgery there are a multitude of risks such as vessel injuries, blood loss, incomplete tumor resection, etc. In order to avoid these risks the surgeons perform a planning of a surgical intervention. A good graphical representation of the liver and its inner structures is of great importance for a good planning. In this work we introduce a new planning system for liver...
This paper presents an automated solution for precise detection of fiducial screws from three-dimensional (3D) Computerized Tomography (CT)/Digital Volume Tomography (DVT) data for image-guided ENT surgery. Unlike previously published solutions, we regard the detection of the fiducial screws from the CT/DVT volume data as a pose estimation problem. We thus developed a model-based solution. Starting...
Numerous phantoms for human organs are commercially available or designed for scientific purposes. None of these combine the imaging possibility with color Doppler ultrasound (CDU) and computer tomography (CT) while providing vessel branches with bifurcations as natural landmarks. We designed, built and evaluated a flow model with vessel tree which can be imaged with CDU and CT. It aims at development...
Irreversible electroporation (IRE) has shown promise for the therapeutic treatment of focal disease, including tumors. The effects of treatment are dependent on the electric field distribution, which may be predicted with numerical modeling. In order to improve the effectiveness and scope of IRE therapies, techniques must be developed for designing protocols capable of treating large and irregular...
The work reported in this paper aimed at developing and testing an automated method to calculate the biodistribution of a specific PET tracer in mouse brain PET/CT images using an MRI-based 3D digital atlas. Surface-based registration strategy and affine transformation estimation were considered. Such an approach allowed overcoming the lack of anatomical information in the inner regions of PET/CT...
Tracking of lung tumors is imperative for improved radiotherapy treatment. However, the motion of the thoracic organs makes it a complicated task. 4D CT images acquired prior to treatment provide valuable information regarding the motion of organs and tumor, since it is manually annotated. In order to track tumors using treatment-day X-ray images (kV images), we need to find the correspondence with...
A Computer-aided diagnosis (CAD) system aims to facilitate characterization and quantification of abnormalities as well as minimize interpretation errors caused by tedious tasks of image screening and radiologic diagnosis. The system usually consists of segmentation, feature extraction and diagnosis, and segmentation significantly affects the diagnostic performance. In this paper, we propose an automatic...
Automatic or semi-automatic segmentation and tracking of artery trees from computed tomography angiography (CTA) is an important step to improve the diagnosis and treatment of artery diseases, but it still remains a significant challenging problem. In this paper, we present an artery extraction method to address the challenge. The proposed method consists of two steps: (1) a geometric moments based...
Automated image detection of white matter changes of the brain is essentially helpful in providing a quantitative measure for studying the association of white matter lesions with other types of biomedical data. Such study allows the possibility of several medical hypothesis validations which lead to therapeutic treatment and prevention. This paper presents a new clustering-based segmentation approach...
Computer Tomographic Colonography, combined with computer-aided detection (CAD), is a promising emerging technique for colonic polyp analysis. We present a CAD scheme for polyp flagging based on new texture and geometric features that consider both the information in the candidate polyp location and its immediate surrounding area, testing multiple sizes. The proposed algorithm is tested with ground...
The paper describes a set of approaches and routines designed to improve results in CT based 3D subtractive angiography of lower extremities via better global locally defined image data registration. Starting from the generic concept of 3D disparity-based flexible registration, modifications of this idea are made founded on prior anatomical knowledge, as segmentation into individual bone areas, their...
A novel approach is proposed for generating data driven models of the lung nodules appearing in low dose CT (LDCT) scans of the human chest. Four types of common lung nodules are analyzed using Active Appearance Model methods to create descriptive lung nodule models. The proposed approach is also applicable for automatic classification of nodules into pathologies given a descriptive database. This...
At present, the maximum spatial resolution of state-of-the-art PET scanners is not better than 5 mm, whereas the maximum resolution obtained in the resulting images is approximately 10 mm. At least some of this difference is a result of an inherent, complex noise component that can be eliminated using “supersampling”. The aim of the study was to apply the supersampling technique to PET image recordings...
In X-ray guided bronchoscopy of peripheral pulmonary lesions, airways and nodules are hardly visible in X-ray images. Transbronchial biopsy of peripheral lesions is often carried out blindly, resulting in degraded diagnostic yield. One solution of this problem is to superimpose the lesions and airways segmented from preoperative 3D CT images onto 2D X-ray images. A feature-based 2D/3D registration...
The estimation of human femur morphology and angulation provide useful information for assisted surgery, follow-up evaluation and prosthesis design, cerebral palsy management, congenital dislocation of the hip and fractures of the femur. Conventional methods that estimate femoral neck anteversion employ planar projections because accurate 3D estimations require complex reconstruction routines. In...
Fast instance generation is a key requirement in atlas-based registration and other problems that need a large number of atlas instances. This paper describes a new method to represent and construct intensity atlases. Both geometry and intensity information are represented using B-spline deformation lattices; intensities are approximated using the multi-level B-spline approximation algorithm during...
This paper presents a method to detect 128 EEG electrodes in image study and to merge with the Nuclear Magnetic Resonance volume for better diagnosis. First we propose three hypotheses to define a specific acquisition protocol in order to recognize the electrodes and to avoid distortions in the image. In the second instance we describe a method for segmenting the electrodes. Finally, registration...
Identification of lobar fissures in human lungs is a non-trivial task due to their variable shape and appearance, along with the low contrast and high noise in computed tomographic (CT) images. Pathologies in the lungs can further complicate this identification by deforming and/or disrupting the lobar fissures. Current algorithms rely on the general anatomy of the lungs to find fissures affected by...
In this paper, we present an algorithm for automatic liver segmentation from CT scans which is based on a statistical shape model. The proposed method is a hybrid method that combines three steps: 1) Localization of the average liver shape model in a test CT volume via 3D generalized Hough transform; 2) Subspace initialization of the statistical shape model; 3) Deformation of the shape model to adapt...
A moment-based approach is proposed for texture analysis of medical images. The neighborhood of texture pixel is calculated by moments for texture feature extraction. After verified on Brodatz textures, the moment-based texture analysis method is applied on CT liver scan classification and prostate ultrasound segmentation. A support vector machine and a multi-channel active contour model are used...
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