Automated examination timetabling generally refers to timetabling for centralized examination. There are few literatures researching on automated timetabling for make-up examination and final clear examination, in fact, there are great differences between timetabling for make-up examination and final clear examination and that for centralized examination. The paper put forward an idea based on greedy method to realize automated timetabling for make-up examination and final clear examination, be compatible with manual timetabling results, allocate resource reasonably, and solve various hard and soft conditions to satisfy users. Carrying high efficiency and low cost, the algorithm can be applied extensively in colleges for timetabling for make-up examination and final clear examination.