The Saramta peridotite massif is located within the Sharyzhalgai complex, SW margin of the Siberian craton. The Saramta massif was formed in the Archean and then juxtaposed with granulites of crystalline basement of the Siberian craton. The Saramta harzburgites are highly refractory in terms of lack of residual clinopyroxene, olivine Mg-number (up to 0.937), and spinel Cr-number (∼0.5), suggesting high degree of partial melting. Detailed study of their microstructures shows that they have extensively reacted with a SiO 2 -rich melt, leading to the crystallization of orthopyroxene, clinopyroxene, amphibole and spinel at the expense of olivine. The major element compositions of the least reacted harzburgites are similar to the residues of refractory peridotites produced by the fractional melting (initial melting pressures >3GPa and melt fractions ∼40%). Moreover, non-residual clinopyroxenes are highly depleted in Yb, Zr and Ti, but highly enriched in LREE. A two-stage history is proposed for the Saramta peridotite: (1) primitive mantle underwent depletion in the garnet stability field followed by melting in the spinel stability field; (2) refractory harzburgites underwent refertilization by SiO 2 -rich melt in supra-subduction zone. Rare Saramta lherzolites probably formed from more refractory harzburgites as a result of such a melt–rock reaction. The Saramta peridotites are similar to low-T coarse-grained peridotites of subcratonic mantle. Processes of their formation, as reflected by textures and composition of minerals of the Saramta peridotites, are characteristic of the early stages of subcratonic mantle formation.