Fermentation of biomass residues and second generation biomasses is potentially a way to enable a sustainable production of hydrogen. Simulation models which calculate mass and energy balances, developed with Aspen Plus ® , are used to integrate the process steps necessary to produce pure hydrogen from biomass in a 2-stage fermentation process. Process and heat integration are introduced to reduce the high water and heat demand of the process, connected to the low substrate concentrations in the involved process streams. The results show that the recirculation of process effluents, together with the use of properly designed heat exchangers, can reduce the water and heat demand up to 90% from a non-integrated process, but is also subject to restrictions due to an increase in osmolality in the system.