Superparamagnetic properties of self-aggregated cobalt nanoparticles in the perfluorinated sulfo-cation membrane (MF-4SK) prepared by ion-exchange method were investigated by transmission electron microscopy (TEM) and superconducting quantum interference device (SQUID) magnetometry at various temperatures. Our experimental results show that cobalt nanoparticles in MF-4SK exhibit superparamagnetic properties above the blocking temperature (T B ), which varies from ~80 to ~300K depending on the cobalt concentration at 100Oe applied field. The average particle radius of 3.8nm inferred from Langevin function fit for the concentration of 7.8x10 1 9 cobalt atoms per 1g of polymer film is in good agreement with TEM observation. This experimental evidence suggests that cobalt nanoparticles in the polymer film obey a single-domain theory. The results are discussed in the light of current theory for the superparamagnetic behavior of magnetic nanoparticles.