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Two methods for structure-based computational ligand design are reviewed. Hydrophobicity maps allow to quantitatively estimate and graphically display the propensity of nonpolar groups to bind at the surface of a protein target [Scarsi etal., Proteins Struct. Funct. Genet., 37 (1999) 565].The program SEED (Solvation Energy for Exhaustive Docking) finds optimal positions and orientations of nonpolar...
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