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The complexity of full-cell metabolic and regulatory pathways currently hinders high accuracy biological simulations with traditional Ordinary Differential Equation (ODE) solver-based methodologies. In this paper event-driven simulators used to tackle problems of similar complexity in Very Large Scale Integration (VLSI) digital designs are employed to trade-off complexity for accuracy. An event-driven...
Memory-processor integration offers new opportunities for reducing, the energy of a system. In the case of embedded systems, where memory access patterns can typically be profiled at design time, one solution consists of mapping the most frequently accessed addresses onto the on-chip SRAM to guarantee power and performance efficiency. In this work, we propose an algorithm for the automatic partitioning...
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