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In an effort to increase the density of sequence-based markers for the horse genome we generated 9473 BAC end sequences (BESs) from the CHORI-241 BAC library with an average read length of 677 bp. BLASTN searches with the BESs revealed 4036 meaningful hits (E ≤ 10 −5 ) in the human genome that provide useful markers for the human–horse comparative map. The 4036 BLASTN hits allowed the anchoring...
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