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As an important epigenetic marker in identifying biological elements and processes in mammalian genomes, CpG islands (CGI) play significant roles in DNA methylation, gene regulation, epigenetic inheritance, gene mutation, chromosome inactivation and nuclesome retention. Investigating the CpG islands and their structures is a rigorous task because of unknown structures and the exponential number of...
Conventional character-analysis-based techniques in genome analysis manifest three main shortcomings—inefficiency, inflexibility, and incompatibility. In our previous research, a general framework, called DNA As X was proposed for character-analysis-free techniques to overcome these shortcomings, where X is the intermediates, such as digit, code, signal, vector, tree, graph network, and so on. In...
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