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Computer architectures continue to develop rapidly towards massively parallel and heterogeneous systems. Thus, easily extensible yet highly efficient parallelization approaches for a variety of platforms are urgently needed. In this paper, we present SWhybrid, a hybrid computing framework for large-scale biological sequence database search on heterogeneous computing environments with multi-core or...
MapReduce is a very popular programming model to support parallel and distributed large-scale data processing. There have been a lot of efforts to implement this model on commodity GPU-based systems. However, most of these implementations can only work on a single GPU. And they can not be used to process large-scale datasets. In this paper, we present a new approach to design the MapReduce framework...
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