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The comparison of DNA sequences is a classic problem in molecular biology. Forensic applications uses this comparison for personal identication. For instance, in the USA, the CODIS system has today 14.9 million DNA proles stored on its database. To accelerate the recurrent task to query into similar databases, this work presents a hardware acderator for the parallel alignment of multiple DNA sequences,...
When implementing Artificial Neural Networks with imperative programing languages, the resulting programs are usually highly coupled. This problem usually hampers distribution over multiple processors, especially when the ANN executes on general-purpose processors. An emerging technique called Notification Oriented Paradigm (NOP) facilitates the development of distributed and decoupled systems, and...
The recent increase in computing power of FPGAs has allowed its use in areas such as seismic data processing. Additionally, besides the capability of performing computations in parallel way, FPGAs also support application-specific number representations. In this type of application, in order to achieve better performance, instead of using the floating-point standard, usually the processing and storage...
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