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In this paper, we propose a new method for the prediction of protein coding regions that is designed to detect novel genes that do not have known, close homologs. The proposed method uses a dynamic representation scheme to convert DNA sequences into a numerical form, and then it uses the nucleotide distribution variance to calculate the period-3 spectrum. The dynamic representation scheme assigns...
This article proposes a new protein-coding-region prediction technique. The technique maps DNA sequences to numerical strings using an adaptive representation scheme and then uses signal processing to identify coding regions. We learn a mapping from symbols to numerical sequences by computing the distribution variance of each nucleotide in a DNA sequence, and then use the period-3 spectrum to distinguish...
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