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Sequence tag‐based peptide search is a critical technology in proteomics for the characterization of proteins from tandem mass spectrometry data. However, the main reason for hindering the full application of such an approach lies that accurately extracting sequence tags responsible for each experimental spectrum. Toward that end, GameTag, a novel cooperative game framework for sequence tag generation...
Determining the monoisotopic peak of a precursor is a first step in interpreting mass spectra, which is basic but non‐trivial. The reason is that in the isolation window of a precursor, other peaks interfere with the determination of the monoisotopic peak, leading to wrong mass‐to‐charge ratio or charge state. Here we propose a method, named pParse, to export the most probable monoisotopic peaks for...
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