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A 3D graphical representation of DNA sequence has been derived from chaos game representation of DNA sequence. The 3D graphical representation also avoids losses of information. According to classifications of four bases of DNA sequence we obtain three characteristic curves. The geometrical centers and fluctuation of three curves have been grouped into a twelve-component vector to represent the DNA...
Chaos game representation (CGR) of DNA sequences and linked protein sequences from genomes was proposed by Jeffrey (Nucleic Acid Research 18 (1990) 2163-2170) and Yu et al. (J. Theor. Biol, 226 (2004) 341-348), respectively. In this paper, we consider the CGR of three kinds of sequences from complete genomes: whole genome DNA sequences, linked coding DNA sequences and linked protein sequences. Some...
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