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High-speed confocal microscopy has shown great promise to yield insights into plant-fungal interactions by allowing for large volumes of leaf tissue to be imaged at high magnification. Currently, segmentation is performed either manually, which is infeasible for large amounts of data, or by developing separate algorithms to extract individual features within the image data. In this work, we propose...
Contour extraction of Drosophila (fruit fly) embryos is an important step to build a computational system for matching expression pattern of embryonic images to assist the discovery of the nature of genes. Automatic contour extraction of embryos is challenging due to severe image variations, including 1) the size, orientation, shape, and appearance of an embryo of interest; 2) the neighboring context...
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