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O-glycosylation of the mammalian protein is investigated. It is serine or threonine specific, though any consensus sequence is still unknown. We have applied support vector machines (SVM) for the prediction of O-glycosylation sites from various kinds of protein information, aiming to investigate the condition for glycosylation and elucidate the mechanisms. In the present study, first we focus on the...
O-glycosylation of the mammalian protein is studied. It is serine or threonine specific, though any consensus sequence is still unknown. We have been applied support vector machines (SVM) for the prediction of O-glycosylation sites from various kinds of protein information, aiming to investigate a glycosylation condition and elucidate the mechanisms. In the present study, we focus on the distribution...
Mucin-type O-glycosylation is one of the main types of the mammalian protein glycosylation. It is serine (Ser) or threonine (Thr) specific, though any consensus sequence is still unknown. In this report, support vector machines (SVM) are used for the prediction of O-glycosylation for each Ser or Thr site in the protein sequences. 99 mammalian protein sequences are selected from UniProt8.0. A certain...
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