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Thanks to the huge amount of sequenced data that is becoming available, building scalable solutions for supporting query processing and data analysis over genomics datasets is increasingly important. This paper presents GDMS, a scalable Genomic Data Management System for querying region-based genomic datasets; the focus of the paper is on the deployment of the system on a cluster hosted by CINECA.
In the computational biology community, machine learning algorithms are key instruments for many applications, including the prediction of gene-functions based upon the available biomolecular annotations. Additionally, they may also be employed to compute similarity between genes or proteins. Here, we describe and discuss a software suite we developed to implement and make publicly available some...
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