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The complexity of biological data is a difficult challenge for data integration. Thus, this study develops a localized web service platform for the specific bioinformatics study needs of Southwest University of China. Our platform includes the following three innovation features, (1) Graphical Survival time analysis kit; (2) Codon Deviation Coefficient (CDC) computing kit and (3) Long non-coding RNA...
The recent next-generation sequencing machines generate sequences at an unprecedented rate, and a sequence is not short any more called read. The reference sequences which are aligned reads against are also increasingly large. Efficiently mapping large number of long sequences with big reference sequences poses a new challenge to sequence alignment. Sequence alignment algorithms become to match on...
Flavonone 3-hydroxylase (F3H), anthocyanidin reductase (ANR) encoded by BANYULS (BAN) gene and glutathione S-transferase encoded by TRANSPARENT TESTA 19 (TT19) gene are three key enzymes in flavonoid pathway, playing important roles in the synthesis and transport of anthocyanin and proanthocyanidin. However, little is known about the expression variations and the regulatory network in Brassica. In...
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