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Some regions in proteins play a critical role in determining their structure and function. Examples include flexible regions such as hinges which allow domain motions, and highly conserved functional interfaces which allow interactions with other proteins. Detecting these regions facilitates the analysis and simulation of protein rigidity and conformational changes and aids in characterizing protein-protein...
We introduce a multimeric docking refinement method that uses a scoring function based on a tight coupling between evolutionary conservation, geometry and pairwise interactions. Detection of protein complexes and their structures is crucial for understanding the role of protein complexes in the basic biology of organisms. Computational methods can provide researchers with a good starting point for...
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