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Although the first sponge genome project has already started releasing completed sequences, only a very small number of annotated sponge genomic sequences has so far been published. In addition, no gene-prediction software optimised for sponges is available yet. In the present paper, we present the performance of Arabidopsis-optimised Genscan as tested on sponge genes. All genes whose genomic and...
The present work covers original information on aphids (Hemiptera: Aphidoidea) from Greece during 1995–2005. The individual aphid taxa were collected from their host plants and identified. The plant taxa were classified in two major categories: cultivated and self-sown. The cultivated ones were classified as: herbaceous, climbing and trees. The selfsown ones were classified as: annual herbaceous,...
The marshland vegetation of the class Phragmito-Magnocaricetea in Croatia is presented in a single place for the first time. All the available relevés from the literature have been assembled and supplemented with the results of field research. Thirty-three communities have been established, shown in a synoptic table drawn up on the basis of 486 relevés. The communities are understood according to...
The present study was conducted to evaluate the protective effects of vitamin E and selenium (Se) application on alteration of antioxidant enzyme activities against cigarette smoking induced oxidative damage in brains, kidneys and liver of mice. Male mice (balb/c) were exposed to cigarette smoke and treated with Se and/or vitamin E. Glutathione transferase (GST), glutathione peroxidase (GPX), glutathione...
The morphology of poorly known freshwater amoebae, Saccamoeba wellneri Siemensma, 1987 and Saccamoeba limna Bovee, 1972, were investigated using living observations at light microscopic level. S. wellneri was collected from Karloveské rameno branch of the Danube River and Štrkovecké jazero lake in Bratislava, Slovakia. Its locomotive form is typical with crescent-shaped and bipyramidal crystals and...
The Balıkdamı Wetland, an impoundment of the upper course of the Sakarya River located near Sivrihisar (Eskişehir, Central Anatolia), is one of the most important bird conservation areas in Turkey. This area also encompasses the mouth of the torrential Göksu Stream, which is partly hyporheic. During this study (2001–2003), 1,471 specimens representing 34 taxa of aquatic Oligochaeta were collected...
Copper is known to induce oxidative stress in a number of models. It was shown that many pathophysiological events were associated with oxidative stress. Further, oxidative stress can increase gene expression of cytokines and of metalloproteinases. We previously found that copper toxic effects in isolated perfused rat livers were associated with significant oxidative stress (as assessed by lipid peroxidation,...
In 2003, 26 Heteroptera species (16 aquatic and 10 semiaquatic) were collected from 53 sampling sites in the Szigetköz region in Hungary. Hyocoris cimicoides and Gerris argentatus were the most frequent aquatic and semiaquatic species, respectively. Large differences both in the species number and species composition were observed among the different flood-prevention areas, arm systems and habitats...
Cobalt is one of the possible contaminants originating from radioactive wastes or from metal mines and refineries. This paper describes sorption of cobalt by the foliose lichen Hypogymnia physodes from CoCl2 solutions spiked with 60Co2+ in laboratory experiments. Maximum uptake was reached within 1 hour; the biosorption after 24 hours is not pH-dependent within the range of pH 4–7, negligible at pH...
The enzyme CP4 5-enolpyruvyl shikimate-3-phosphate synthase (EPSPS; EC 2.5.1.19) from Agrobacterium tumefaciens CP4, encoded by the aroA gene, has been used for the construction of genetically modified crops resistant to total herbicide glyphosate. During the study of possible horizontal gene transfer of aroA CP4 gene from genetically modified food in gastrointestinal tract to bacterial community...
Gaeumannomyces graminis var. tritici, Fusarium culmorum and F. moniliforme are highly important and widespread pathogens of wheat in Turkey. Trichoderma isolates have been used as biocontrol agents to protect plants against soilborne diseases in several crops. The present work was carried out to evaluate the potential of Trichoderma harzianum isolate T1 as biocontrol agents for G. graminis, F. culmorum...
Fatty acid composition of liver and muscle tissues of immature and mature Oncorhynchus mykiss fed on two different diets were determined. Fatty acid analyses were carried out by gas chromatography. Palmitic acid (C16:0), oleic acid (C18:1 n-9), linoleic acid (C18:2 n-6) and docosahexaenoic acid (C22:6 n-3) were the major components in both liver and muscle tissues of immature and mature rainbow trout...
The life cycle and mating behavior of Helicotylenchus multicinctus (Nematoda: Hoplolaimidae) were observed in vitro on excised roots of Musa cavendishii in gnotobiotic culture. Eggs hatched into juveniles whose appearance and structure were similar to those of the adults. Juveniles grew in size and each juvenile stage was terminated by a molt. H. multicinctus had four juvenile stages. The first molt...
Presented study focused on the influence of Cochliobolus sativus isolates origin on pathogenicity towards wheat and barley seedlings in comparison with pathogenicity of certain Fusarium species and Microdochium nivale. The efficacy of fungicide seed treatment against C. sativus was estimated. The C. sativus isolates were collected from different locations and were isolated from wheat, barley and sunflower...
Lavandula genus is an important member of Labiatae (Lamiaceae) family. People use commonly Lavandula stoechas as a medicinal plant for various diseases around the world and also in Turkey. The aim of this study was to investigate cytotoxic and genotoxic effects of aqueous extracts (40, 80 and 120 g/L) from L. stoechas flowers on Allium cepa root tip meristem cells. For this purpose, A. cepa onion...
Fluorescence in situ hybridisation (FISH) is a rapid and reliable technique for chromosomal investigations that is used for a wide variety of cytogenetic purposes at present. This molecular-cytogenetic method has been developed continuously for many years. As a consequence, various modifications with different kinds of fluorescently labelled probes have been introduced to optimise the detection of...
The protein folding kinetics of hen egg white lysozyme (HEWL) was studied using experimental and bioinformatics tools. The structure of the transition state in the unfolding pathway of lysozyme was determined with stopped-flow kinetics using intact HEWL and its chemically modified derivative, in which six lysine residues have been modified. The overall consistency of φ-value (φ ≈ 1) indicates that...
In this study, two extracting methods (sonication and dispersing) and three solvents (90% acetone, N,N′-dimethylformamide and methanol) were compared for their ability to extract chlorophyll a of freshwater phytoplankton. Measurements were performed with both spectrophotometry and high-performance liquid chromatography. Results showed that (i) cell disruption is essential and that (ii) the method...
The signal crayfish, Pacifastacus leniusculus (Dana, 1852), was recorded in the Slovak-Austrian stretch of the Morava (March) River in the Záhorie region in August 2006. This is the first confirmed record of a non-indigenous crayfish species of American origin in Slovakia. Most likely, signal crayfish were intentionally released to the river by Austrian fishermen, or invaded from adjacent water bodies...
In the past few decades groups of scientists have focused their study on relatively new microorganisms called endophytes. By definition these microorganisms, mostly fungi and bacteria, colonise the intercellular spaces of the plant tissues. The mutual relationship between endophytic microorganisms and their host plants, taxanomy and ecology of endophytes are being studied. Some of these microorganisms...
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