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Wireless capsule endoscopy (WCE) is a revolutionary imaging technique that enables detailed inspection of the interior of the whole gastrointestinal tract in a non-invasive way. However, viewing WCE videos is a very time-consuming, and labor intensive task for physicians. In this paper, we propose an automatic method for bleeding detection in WCE images. A novel series of descriptors which combine...
Functional motor impairment due to Parkinson's disease and other movement disorders are currently assessed with visual rating scales such as the Unified Parkinson's Disease Rating Scale (UPDRS). These methods rely on the subjective judgment of a rater to assign scores representing the extent of impairment while subjects perform prescribed activities. We describe a new model-based framework that uses...
Wireless capsule endoscopy (WCE) has been validated to be an important tool in the evaluation of gastrointestinal (GI) tract. Compared with traditional endoscope technologies, its non-invasiveness property meets with great favor of patients. However, from physician's point of view, WCE video suffers from low resolution, limited illumination, irregular movement, more importantly, imbalanced rate of...
The creation of an automatic diabetic retinopathy screening system using retina cameras is currently receiving considerable interest in the medical imaging community. The detection of microaneurysms is a key element in this effort. In this work, we propose a new microaneurysms segmentation technique based on a novel application of the radon transform, which is able to identify these lesions without...
This paper proposes a markerless video analytic system for quantifying body part movements in pediatric epilepsy monitoring. The system utilizes colored pajamas worn by a patient in bed to extract body part movement trajectories, from which various features can be obtained for seizure detection and analysis. Hence, it is non-intrusive and it requires no sensor/marker to be attached to the patient's...
Several algorithms have been recently proposed for the analysis of dermoscopy images and the detection of melanomas. However, the pigment network is not considered in most of these works, although this cue plays a major role in clinical diagnosis routines. This paper proposes an algorithm for the detection of the pigment network. The algorithm is based on a bank of directional filters (difference...
An event-related potential (ERP) speller is a brain computer interface (BCI) based on the detection on ERPs that can be used as spelling device for those people deprived of other means of communication. In the present online study we investigated in twelve participants the performance of an ERP speller based on the rapid serial visual presentation paradigm (RSVP). Three variants of the RSVP speller...
We describe a novel approach for screening retinal imagery to detect evidence of abnormalities. In this paper, we focus our efforts on age-related macular degeneration (AMD), a pathology that may often go undetected in the early or intermediate stages, and can lead to a neovascular form often resulting in blindness, if untreated. Our strategy for retinal anomaly detection is to employ a single class...
Identification of intracellular signal transduction pathways plays an important role in understanding the mechanisms of how cells respond to external stimuli. The availability of high throughput microarray expression data and accumulating knowledge of protein-protein interactions have provided us with useful information to infer condition-specific signal transduction pathways. We propose a novel method...
In this paper, results of a diabetic retinopathy screening experiment are presented which is based solely on the findings of a microaneurysm detector. For this purpose, an ensemble-based algorithm developed by our research group was used; this provided promising results in our earlier experiments. At its best, the 1200 image of the Messidor database is classified by this detector with a sensitivity...
Presence of peripapillary chorioretinal atrophy (PPA) is considered one of the risk factors for glaucoma. It can be identified as bright regions in retinal fundus images, and therefore, incorrectly included as the part of the optic disc regions in the automated disc detection scheme. For potential risk assessment and use in improving optic disc segmentation, a computerized detection of PPA was investigated...
The diagnosis and treatment of malaria infection requires detecting the presence of the malaria parasite in the patient as well as identification of the parasite species. We present an image processing-based approach to detect parasites in microscope images of a blood smear and an ontology-based classification of the stage of the parasite for identifying the species of infection. This approach is...
In this paper we introduced a digital staining method for histopathology images captured with an n-band multispectral camera. The method consisted of two major processes: enhancement of the original spectral transmittance and the transformation of the enhanced transmittance to its target spectral configuration. Enhancement is accomplished by shifting the original transmittance with the scaled difference...
VirtualShave is a novel tool to remove hair from digital dermatoscopic images. First, individual hairs are identified using a top-hat filter followed by morphological postprocessing. Then, they are replaced through PDE-based inpainting with an estimate of the underlying occluded skin. VirtualShave's performance is comparable to that of a human operator removing hair manually, and the resulting images...
For medical diagnosis, blood is an indispensable indicator for a wide variety of diseases, i.e. hemic, parasitic and sexually transmitted diseases. A robust detection and exact segmentation of white blood cells (leukocytes) in stained blood smears of the peripheral blood provides the base for a fully automated, image based preparation of the so called differential blood cell count in the context of...
In this paper we implement the 7-point checklist, a set of dermoscopic criteria widely used by clinicians for melanoma detection, on smart handheld devices, such as the Apple iPhone and iPad. The application developed is using sophisticated image processing and pattern recognition algorithms, yet it is light enough to run on a handheld device with limited memory and computational speed. When combined...
In this paper we compare the classification accuracy of using compressed domain color (CDC) descriptors versus traditional full decoded images, for the purposes of topographic classification of wireless capsule endoscopy images. Results using a dataset of 26469 images, divided into stomach, small intestine and large intestine show a difference in classification accuracy below 1%. We also show that...
Analysis of Wireless Capsule Endoscopy (CE) images has become a very active area of research since this novel technology enabled access to previously inaccessible areas of the gastrointestinal tract, especially the small intestine. Art has investigated automatic segmentation of organ boundaries, detection of lesions and bleeding as well as other supervised and unsupervised analysis. However, all of...
As an effort to build an automated and objective system for pathologic image analysis, we present, in this paper, a computerized image processing method for identifying nuclei, a basic biological unit of diagnostic utility, in microscopy images of glioma tissue samples. The complete analysis includes multiple processing steps, involving mode detection with color and spatial information for pixel clustering,...
The process required to track cellular structures is a key task in the study of cell migration. This allows the accurate estimation of motility indicators that help in the understanding of mechanisms behind various biological processes. This paper reports a particle-based fully automatic tracking framework that is able to quantify the motility of living cells in time-lapse images. Contrary to the...
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