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Coronavirus disease 2019 (COVID‐19) pandemic has caused high number of infections and deaths of healthcare workers globally. Distribution and possible transmission route of SARS‐CoV‐2 in hospital environment should be clarified. We herein collected 431 environmental (391 surface and 40 air) samples in the intensive care unit (ICU) and general wards (GWs) of three hospitals in Wuhan, China from February...
Next-generation sequencing (NGS) enables the recovery of pathogen genomes from clinical samples without the need for culturing. Depletion of host/microbiota components (e.g., ribosomal RNA and poly-A RNA) and whole DNA/cDNA amplification are routine methods to improve recovery results. Using mixtures of human and influenza A virus (H1N1) RNA as a model, we found that background depletion and whole...
A huge amount of association relationships among biological entities (e.g., diseases, drugs, and genes) are scattered in biomedicai literature. How to extract and analyze such heterogeneous data still remains a challenging task for most researchers in the biomedicai field. Natural language processing (NLP) has the potential in extracting associations among biological entities from literature. However,...
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